The Golden Spike: Downloads

• Download the Choe et al. publication from Genome Biology.

• Download the raw *.CEL files described in the publication. This file is about 20 Mb in size.

• Download the DAT files for the Golden Spike microarrays. This file is a 184 MB zipped tar archive.

• Download the 10 best expression summary datasets depicted in Figure 7F of the manuscript. These are R data files (use the "load" command to import them).

• Assignment of probe sets to clones and fold change values.

1. R data file, containing a vector called "mapping.unique" with names = probe set names and values = fold changes, with "-1" depicting probe sets whose target RNAs were not spiked in ("empty"), and "-2" marking "mixed" probe sets.

2. Probe set-to-clone mappings, in tab-delimited text and Excel file formats.

• Unix: Installation instructions for the "goldenspike" R package.

  R scripts for generating expression summary datasets and recreating Figure 7 from the Choe et al. paper.